Powering insights across the life sciences

If it involves biology and big data, Watershed is the solution. With 100+ unique data analysis templates, customizable workflows, and a dedicated team of bioinformaticians, no analysis is too complex.

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Explore Applications

Whole Genome Sequencing (WGS) & Whole Exome Sequencing (WES)

Variant Calling

Long-Read Sequencing

Gene Editing

Public Datasets

Genome-Wide Association Studies (GWAS)

Mendelian Randomization




Single Cell RNA-Seq

Public Datasets


Spatial Sequencing

Immune Repertoire Sequencing

Mass Spectrometry



Custom Integrations

Public Datasets


Cell Labeling

Cell Segmentation


de novo Assembly


Read the latest insights

Learn about new research, best data practices, and more.

Case Study

How Violet Therapeutics Scaled Their Target Discovery Platform with Watershed

Violet Therapeutics is a pre-clinical stage company leveraging their first-in-class platform, based on RABID-seq technology, to map and mine the cellular connectome at scale.
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The Future of Human Gene Editing

Coming on 3/7, Watershed has the honor of hosting a webinar by groundbreaking genetics researcher Nancy L. Craig.
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Geneformer: Powering Drug Target Discovery with Network Biology

Geneformer is a tool developed by Theodoris et al. (Nature 2023) to predict tissue-specific gene network dynamics from single-cell transcriptomic data.
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New Automation Features for Streamlined Data Processing and Analysis

Our new workflow automation features help you accelerate high-volume data processing from upload to output.
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